Rujukan Hopanoid

  1. 1 2 3 "Deciphering the evolutionary history of microbial cyclic triterpenoids". Free Radical Biology & Medicine. Early Life on Earth and Oxidative Stress. 140: 270–278. August 2019. doi:10.1016/j.freeradbiomed.2019.05.002. PMID 31071437.
  2. 1 2 3 "Bacterial membrane lipids: diversity in structures and pathways". FEMS Microbiology Reviews. 40 (1): 133–59. January 2016. doi:10.1093/femsre/fuv008. PMID 25862689.
  3. "The chemistry of dammar resin". Journal of the Chemical Society (Resumed) (dalam bahasa Inggeris): 3132–3140. 1955-01-01. doi:10.1039/JR9550003132. ISSN 0368-1769.
  4. 1 2 3 4 "Sterols and other triterpenoids: source specificity and evolution of biosynthetic pathways". Organic Geochemistry (dalam bahasa Inggeris). 36 (2): 139–159. 2005-02-01. doi:10.1016/j.orggeochem.2004.06.013.
  5. "Early developments in petroleum geochemistry". Organic Geochemistry (dalam bahasa Inggeris). 33 (9): 1025–1052. 2002-09-01. doi:10.1016/S0146-6380(02)00056-6.
  6. William W. Christie. "The AOCS Lipid Library. Hopanoids". American Oil Chemists' Society. Archived from the original on 2016-03-05. Retrieved 2015-11-17.
  7. "Hopanoids - AOCS Lipid Library". 2016-03-05. Diarkibkan daripada yang asal pada 2016-03-05. Dicapai pada 2020-03-06.
  8. 1 2 "Targeted genomic detection of biosynthetic pathways: anaerobic production of hopanoid biomarkers by a common sedimentary microbe". Geobiology. 3 (1): 33–40. 2005. doi:10.1111/j.1472-4669.2005.00041.x.
  9. 1 2 3 4 "Hopanoid lipids: from membranes to plant-bacteria interactions". Nature Reviews. Microbiology. 16 (5): 304–315. May 2018. doi:10.1038/nrmicro.2017.173. PMC 6087623. PMID 29456243.
  10. 1 2 3 "Functional convergence of hopanoids and sterols in membrane ordering". Proceedings of the National Academy of Sciences of the United States of America. 109 (35): 14236–40. August 2012. Bibcode:2012PNAS..10914236S. doi:10.1073/pnas.1212141109. PMC 3435179. PMID 22893685.
  11. "Methylation at the C-2 position of hopanoids increases rigidity in native bacterial membranes". eLife. 4: e05663. January 2015. doi:10.7554/eLife.05663. PMC 4337730. PMID 25599566.
  12. 1 2 3 "Hopanoids as functional analogues of cholesterol in bacterial membranes". Proceedings of the National Academy of Sciences of the United States of America. 112 (38): 11971–6. September 2015. Bibcode:2015PNAS..11211971S. doi:10.1073/pnas.1515607112. PMC 4586864. PMID 26351677.
  13. "Squalene-hopene cyclase from Methylococcus capsulatus (Bath): a bacterium producing hopanoids and steroids". Biochimica et Biophysica Acta (BBA) - Lipids and Lipid Metabolism. 1391 (2): 223–32. March 1998. doi:10.1016/S0005-2760(97)00212-9. PMID 9555026.
  14. "The relative effect of sterols and hopanoids on lipid bilayers: when comparable is not identical". The Journal of Physical Chemistry B. 117 (50): 16129–40. December 2013. doi:10.1021/jp409748d. PMID 24299489.
  15. "Hopanoid production is required for low-pH tolerance, antimicrobial resistance, and motility in Burkholderia cenocepacia". Journal of Bacteriology. 193 (23): 6712–23. December 2011. doi:10.1128/JB.05979-11. PMC 3232912. PMID 21965564.
  16. "Hopanoids play a role in membrane integrity and pH homeostasis in Rhodopseudomonas palustris TIE-1". Journal of Bacteriology. 191 (19): 6145–56. October 2009. doi:10.1128/JB.00460-09. PMC 2747905. PMID 19592593.
  17. "Hopanoid lipids compose the Frankia vesicle envelope, presumptive barrier of oxygen diffusion to nitrogenase". Proceedings of the National Academy of Sciences of the United States of America. 90 (13): 6091–4. July 1993. Bibcode:1993PNAS...90.6091B. doi:10.1073/pnas.90.13.6091. PMC 46873. PMID 11607408.
  18. "Covalently linked hopanoid-lipid A improves outer-membrane resistance of a Bradyrhizobium symbiont of legumes". Nature Communications. 5 (1): 5106. October 2014. Bibcode:2014NatCo...5.5106S. doi:10.1038/ncomms6106. PMID 25355435. Unknown parameter |displayauthors= ignored (bantuan)
  19. 1 2 "2-Methylhopanoids are maximally produced in akinetes of Nostoc punctiforme: geobiological implications". Geobiology. 7 (5): 524–32. December 2009. doi:10.1111/j.1472-4669.2009.00217.x. PMC 2860729. PMID 19811542.
  20. "Hopanoids are formed during transition from substrate to aerial hyphae in Streptomyces coelicolor A3(2)". FEMS Microbiology Letters. 189 (1): 93–5. August 2000. doi:10.1111/j.1574-6968.2000.tb09212.x. PMID 10913872.
  21. "Metabolic plasticity for isoprenoid biosynthesis in bacteria". The Biochemical Journal. 452 (1): 19–25. May 2013. doi:10.1042/BJ20121899. PMID 23614721.
  22. 1 2 "Biosynthesis of Squalene from Farnesyl Diphosphate in Bacteria: Three Steps Catalyzed by Three Enzymes". ACS Central Science. 1 (2): 77–82. 2015-05-27. doi:10.1021/acscentsci.5b00115. PMC 4527182. PMID 26258173. Unknown parameter |displayauthors= ignored (bantuan)
  23. "Bacteria Do It Differently: An Alternative Path to Squalene". ACS Central Science. 1 (2): 64–5. May 2015. doi:10.1021/acscentsci.5b00142. PMC 4827487. PMID 27162951.
  24. 1 2 "Squalene-hopene cyclases". Applied and Environmental Microbiology. 77 (12): 3905–15. June 2011. doi:10.1128/AEM.00300-11. PMC 3131620. PMID 21531832.
  25. 1 2 "Squalene-hopene cyclase: catalytic mechanism and substrate recognition". Chemical Communications (4): 291–301. February 2002. doi:10.1039/B108995C. PMID 12120044.
  26. "Squalene-hopene cyclases-evolution, dynamics and catalytic scope". Current Opinion in Structural Biology. Multi-protein assemblies in signaling • Catalysis and regulation. 41: 73–82. December 2016. doi:10.1016/j.sbi.2016.05.019. PMID 27336183.
  27. "Site-directed mutagenesis of squalene-hopene cyclase: altered substrate specificity and product distribution". Chemistry & Biology (dalam bahasa English). 7 (8): 643–9. August 2000. doi:10.1016/S1074-5521(00)00003-X. PMID 11048954.CS1 maint: unrecognized language (link)
  28. "Non-specific biosynthesis of hopane triterpenes by a cell-free system from Acetobacter pasteurianum". European Journal of Biochemistry. 112 (3): 541–7. December 1980. doi:10.1111/j.1432-1033.1980.tb06117.x. PMID 7460938.
  29. "Cloning of conserved genes from Zymomonas mobilis and Bradyrhizobium japonicum that function in the biosynthesis of hopanoid lipids". Biochimica et Biophysica Acta (BBA) - Lipids and Lipid Metabolism. 1393 (1): 108–18. July 1998. doi:10.1016/S0005-2760(98)00064-2. PMID 9714766.
  30. "Adenosylhopane: The first intermediate in hopanoid side chain biosynthesis". Organic Geochemistry (dalam bahasa Inggeris). 41 (10): 1075–1081. 2010-10-01. doi:10.1016/j.orggeochem.2010.07.003.
  31. "Ribosylhopane, a novel bacterial hopanoid, as precursor of C35 bacteriohopanepolyols in Streptomyces coelicolor A3(2)". ChemBioChem. 15 (14): 2156–61. September 2014. doi:10.1002/cbic.201402261. PMC 4245026. PMID 25155017. Unknown parameter |displayauthors= ignored (bantuan)
  32. 1 2 "Elucidation of the Burkholderia cenocepacia hopanoid biosynthesis pathway uncovers functions for conserved proteins in hopanoid-producing bacteria" (PDF). Environmental Microbiology. 17 (3): 735–50. March 2015. doi:10.1111/1462-2920.12509. PMID 24888970.
  33. 1 2 "Identification of a methylase required for 2-methylhopanoid production and implications for the interpretation of sedimentary hopanes". Proceedings of the National Academy of Sciences of the United States of America. 107 (19): 8537–42. May 2010. Bibcode:2010PNAS..107.8537W. doi:10.1073/pnas.0912949107. PMC 2889317. PMID 20421508.
  34. 1 2 3 "Discovery, taxonomic distribution, and phenotypic characterization of a gene required for 3-methylhopanoid production". Proceedings of the National Academy of Sciences of the United States of America. 109 (32): 12905–10. August 2012. Bibcode:2012PNAS..10912905W. doi:10.1073/pnas.1208255109. PMC 3420191. PMID 22826256.
  35. "A distinct pathway for tetrahymanol synthesis in bacteria". Proceedings of the National Academy of Sciences of the United States of America. 112 (44): 13478–83. November 2015. Bibcode:2015PNAS..11213478B. doi:10.1073/pnas.1511482112. PMC 4640766. PMID 26483502.
  36. "Hopanoids. 1. Geohopanoids: the most abundant natural products on Earth?". Accounts of Chemical Research. 25 (9): 398–402. September 1992. doi:10.1021/ar00021a003.
  37. 1 2 Summons RE, Lincoln SA (2012-03-30). "Biomarkers: Informative Molecules for Studies in Geobiology". Fundamentals of Geobiology. John Wiley & Sons, Ltd. m/s. 269–296. doi:10.1002/9781118280874.ch15. ISBN 978-1-118-28087-4.
  38. Knoll AH (2003). Life on a young planet: the first three billion years of evolution on Earth. Princeton, N.J.: Princeton University Press. ISBN 0-691-00978-3. OCLC 50604948.
  39. "Biomarker evidence for green and purple sulphur bacteria in a stratified Palaeoproterozoic sea". Nature. 437 (7060): 866–70. October 2005. Bibcode:2005Natur.437..866B. doi:10.1038/nature04068. PMID 16208367.
  40. "Paleoproterozoic sterol biosynthesis and the rise of oxygen". Nature. 543 (7645): 420–423. March 2017. Bibcode:2017Natur.543..420G. doi:10.1038/nature21412. PMID 28264195. |hdl-access= requires |hdl= (bantuan)
  41. 1 2 Ourisson, Guy; Albrecht, Pierre; Rohmer, Michel (1982-07-01). "Predictive microbial biochemistry — from molecular fossils to procaryotic membranes". Trends in Biochemical Sciences (dalam bahasa Inggeris). 7 (7): 236–239. doi:10.1016/0968-0004(82)90028-7. ISSN 0968-0004.
  42. "Hypotheses for the origin and early evolution of triterpenoid cyclases". Geobiology. 5 (1): 19–34. 2007. doi:10.1111/j.1472-4669.2007.00096.x. PMID 36298871 Check |pmid= value (bantuan).
  43. Summons, Roger E.; Jahnke, Linda L.; Hope, Janet M.; Logan, Graham A. (August 1999). "2-Methylhopanoids as biomarkers for cyanobacterial oxygenic photosynthesis". Nature (dalam bahasa Inggeris). 400 (6744): 554–557. doi:10.1038/23005. ISSN 1476-4687. PMID 10448856.
  44. Brocks, J. J. (1999-08-13). "Archean Molecular Fossils and the Early Rise of Eukaryotes". Science. 285 (5430): 1033–1036. doi:10.1126/science.285.5430.1033. PMID 10446042.
  45. French, Katherine L.; Hallmann, Christian; Hope, Janet M.; Schoon, Petra L.; Zumberge, J. Alex; Hoshino, Yosuke; Peters, Carl A.; George, Simon C.; Love, Gordon D. (2015-05-12). "Reappraisal of hydrocarbon biomarkers in Archean rocks". Proceedings of the National Academy of Sciences (dalam bahasa Inggeris). 112 (19): 5915–5920. doi:10.1073/pnas.1419563112. ISSN 0027-8424. PMC 4434754. PMID 25918387.
  46. Kuypers, Marcel M.M.; van Breugel, Yvonne; Schouten, Stefan; Erba, Elisabetta; Sinninghe Damsté, Jaap S. (2004). "N2-fixing cyanobacteria supplied nutrient N for Cretaceous oceanic anoxic events". Geology (dalam bahasa Inggeris). 32 (10): 853. doi:10.1130/G20458.1. ISSN 0091-7613.
  47. Haddad, Emily E.; Tuite, Michael L.; Martinez, Aaron M.; Williford, Kenneth; Boyer, Diana L.; Droser, Mary L.; Love, Gordon D. (August 2016). "Lipid biomarker stratigraphic records through the Late Devonian Frasnian/Famennian boundary: Comparison of high- and low-latitude epicontinental marine settings". Organic Geochemistry (dalam bahasa Inggeris). 98: 38–53. doi:10.1016/j.orggeochem.2016.05.007.
  48. Marynowski, Leszek; Rakociński, Michał; Borcuch, Ewelina; Kremer, Barbara; Schubert, Brian A.; Jahren, A. Hope (June 2011). "Molecular and petrographic indicators of redox conditions and bacterial communities after the F/F mass extinction (Kowala, Holy Cross Mountains, Poland)". Palaeogeography, Palaeoclimatology, Palaeoecology (dalam bahasa Inggeris). 306 (1–2): 1–14. doi:10.1016/j.palaeo.2011.03.018.
  49. "Biosynthesis of 2-methylbacteriohopanepolyols by an anoxygenic phototroph". Proceedings of the National Academy of Sciences of the United States of America. 104 (38): 15099–104. September 2007. Bibcode:2007PNAS..10415099R. doi:10.1073/pnas.0704912104. PMC 1986619. PMID 17848515.
  50. Ricci, J. N.; Michel, A. J.; Newman, D. K. (May 2015). "Phylogenetic analysis of HpnP reveals the origin of 2-methylhopanoid production in Alphaproteobacteria". Geobiology (dalam bahasa Inggeris). 13 (3): 267–277. doi:10.1111/gbi.12129. PMID 25630231.
  51. "Cyanobacterial bacteriohopanepolyol signatures from cultures and natural environmental settings". Organic Geochemistry (dalam bahasa Inggeris). 39 (2): 232–263. 2008-02-01. doi:10.1016/j.orggeochem.2007.08.006.
  52. 1 2 Elling, Felix J.; Hemingway, Jordon D.; Evans, Thomas W.; Kharbush, Jenan J.; Spieck, Eva; Summons, Roger E.; Pearson, Ann (2020-12-29). "Vitamin B 12 -dependent biosynthesis ties amplified 2-methylhopanoid production during oceanic anoxic events to nitrification". Proceedings of the National Academy of Sciences (dalam bahasa Inggeris). 117 (52): 32996–33004. doi:10.1073/pnas.2012357117. ISSN 0027-8424. PMC 7777029. PMID 33318211.
  53. Ricci, Jessica N; Coleman, Maureen L; Welander, Paula V; Sessions, Alex L; Summons, Roger E; Spear, John R; Newman, Dianne K (March 2014). "Diverse capacity for 2-methylhopanoid production correlates with a specific ecological niche". The ISME Journal (dalam bahasa Inggeris). 8 (3): 675–684. doi:10.1038/ismej.2013.191. ISSN 1751-7362. PMC 3930323. PMID 24152713.
  54. 1 2 Zundel, Magali; Rohmer, Michel (July 1985). "Prokaryotic triterpenoids. 3. The biosynthesis of 2beta-methylhopanoids and 3beta-methylhopanoids of Methylobacterium organophilum and Acetobacter pasteurianus ssp. pasteurianus". European Journal of Biochemistry (dalam bahasa Inggeris). 150 (1): 35–39. doi:10.1111/j.1432-1033.1985.tb08984.x. ISSN 0014-2956. PMID 3926496.
  55. Elvert, Marcus; Niemann, Helge (February 2008). "Occurrence of unusual steroids and hopanoids derived from aerobic methanotrophs at an active marine mud volcano". Organic Geochemistry (dalam bahasa Inggeris). 39 (2): 167–177. doi:10.1016/j.orggeochem.2007.11.006.
  56. "Squalene hopene cyclases are protonases for stereoselective Brønsted acid catalysis". Nature Chemical Biology. 11 (2): 121–6. February 2015. doi:10.1038/nchembio.1719. PMID 25503928.
  57. US 2017107160, Newman DK, Kulkarni G, Belin BJ, "Hopanoids producing bacteria and related biofertilizers, compositions, methods and systems", issued 2016-10-19, assigned to California Institute of Technology